Hi, Theia. To answer your first question first.
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Reading what you've written makes me wonder if the huge cloud or the organism, as a whole, is a way of "perceiving" God.
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It is too early to say at this point. String theory suggests that each particle is a physical and
cross-sectional reprentation of a vibrating string. I haven't studied string theory sufficiently to be able to wrap my grey cells around it yet, but I will.
It is tempting to visualise the 'cloud organism' as a way of perceiving God, but I tend towards the idea that the 'organism', our universe, is part of a greater 'host'. This greater 'host' could, indeed, be God.
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And what do you think of the concept that we can, in some way, create our own reality...is it thought that makes the cells behave in a certain way? Or do we not have much choice over that?
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This is a subject I intend to present in a future thread. On the one hand, a thought is our own creation. On the other, a thought is developed from pre-conceived ideas. Underlying beliefs and faith also have an influence on how a thought will interact at the energy level. Whether we can literally create our own reality depends on whether a thought is radiated or not. Within the body, focussed visualisation can be used to heal, providing there is not an underlying negative belief that prevents it from working.
The idea that we transmit energy is nothing new. As far as influencing our environment is concerned, we would need to transmit a set of instructions. This will, by and large, involve transmitting energy and its codependent particles. However, I tend to think that the real answer here would lie in the capabilities of 'strings'. But I think I'm going a bit too far here at this point.
I believe that by means of accurate visualisation, we can create whatever we want. This would involve a mix of personal physical action as well as an apparent mystical interaction at the quanta level. Of course, if you don't believe it, it just won't happen.